Detection of NUDT15 variants in acute lymphoblastic leukemia patients using direct DNA sequencing

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Abstract

Objective: Germline NUDT15 variants is critical determinant of thiopurine intolerance (6-MP: 6-mercaptopurine). 6-MP is used for treatment of acute lymphoblastic leukemia (ALL), especially during maintenance therapy. NUDT15 variants were identified helping to select suitable 6-MP dose for ALL patients.
Subjects and Methods: From June 2016 to June 2017, 30 ALL patients were investigated for NUDT15 variants using direct sequencing method at the Blood Transfusion and Hematology Hospital.
Results: We found that 23 3% of the patients harbored NUDT15 variants, in which 1 patient was homozygous, 4 were heterozygous at p.R139C, and 1 patient was heterozygous at p. V18_V19insGV. In addition, 1 patient was heterozygous for NUDT15 p. V18_V19insGV in combination with p.R139C. We also detected a heterozygous for NUDT15 p.R11Q, which has not been reported before. These NUDT15 variants can occur in the same patients. The patients harboring homozygous and 2 heterozygous NUDT15 variants are more sensitive to 6-MP than other variants.
Conclusion: Results of this study help to select suitable 6-MP dose and to apply direct DNA sequencing technique for detection of NUDT15 variants in ALL.

References

Carter M., Jemth AS., Hagenkort A., et al. (2015), Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2, Nature Communications, 6(7871), pp.1-10.

Hori M., Satou K., Harashima H., Kamiya H. (2010), Suppression of mutagenesis by 8-hydroxy-2'-deoxyguanosine 5'-triphosphate (7,8-dihydro-8-oxo-2'-deoxyguanosine 5'-triphosphate) by human MTH1, MTH2, and NUDT5, Free Radic Biol Med, 48, pp.1197-1201.

Joanne M., Hilden, Patricia A., et al. (2006), Analysis of prognostic factors of acute lymphoblastic leukemia in infants: report on CCG 1953 from the Children's Oncology Group, Blood, 108, pp.441-451.

Liang DC., Yang CP., Liu HC., et al. (2015), NUDT15 gene polymorphism related to mercaptopurine intolerance in Taiwan Chinese children with acute lymphoblastic leukemia, The Pharmacogenomics Journal, 16, pp.536-539.

Meir Wetzler, Richard K., Dodge, Mrozek K., et al. (1999), Prospective Karyotype Analysis in Adult Acute Lymphoblastic Leukemia: The Cancer and Leukemia Group B Experience, Blood, 93(11), pp.3983-93.

Michael A., Teitell and Pandolfi PP., et al. (2009), Molecular Genetics of Acute Lymphoblastic Leukemia, Annu Rev Pathol Mech Dis, 4, pp. 175-198.

Moriyama T., Nishii R., Perez-Andreu V., et al. (2016), NUDT15 Polymorphisms Alter Thiopurine Metabolism and Hematopoietic Toxicity, Nat Genet, 48(4), pp.367-73.

Riccardo Riccardi (2004), Acute Lymphoblastic Leukemia, Orphanet, pp.1-13.

Suzuki H., Fukushima H., Suzuki R., et al. (2016), Genotyping NUDT15 can predict the dose reduction of 6-MP for children with acute lymphoblastic leukemia especially at a preschool age, Journal of Human Genetics, 61(9), pp.797-801.

Suzuki R., Fukushima H., Noguchi E., et al. (2015), Influence of SLCO1B1 polymorphism on maintenance therapy for childhood leukemia, Pediatr. Int., 57, pp.572-77.

Takagi Y., Setoyama D., et al. (2012), Human MTH3 (NUDT18) protein hydrolyzes oxidized forms of guanosine and deoxyguanosine diphosphates: comparison with MTH1 und MTH2, J Biol Chem, 287, pp.21541-49.

Tanaka Y., Kato M., Hasegawa D., et al. (2015), Susceptibility to 6-MP toxicity conferred by a NUDT15 variant in Japanese children with acute lymphoblastic leukaemia, British Journal of Haematology, 17, pp. 109-115.

Williams Hematology, 8e/ Part XI. Neoplastic Lymphoid Diseases/Chapter 93. Acute Lymphoblastic Leukemia.

Yang JJ., Landier W., Yang W., et al. (2015), Inherited NUDT15 Variant Is a Genetic Determinant of Mercaptopurine Intolerance in Children With. Acute Lymphoblastic Leukemia, Journal Of Clinical Oncology, 33(11), pp. 1235-46.

Yang SK., Hong M., Baek J., et al. (2014), A common missense variant in NUDT15 confers susceptibility to thiopurine-induced leukopenia, Nature Genetics, 46(9), pp.1017-20. 16.Zeglam HB., Benhamer A., Aboud A., et al. (2015), Polymorphisms of the thiopurine S-methyltransferase gene among the Libyan population, Libyan J Med, 10, pp.27053.

Published 31-10-2017
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Issue No. 46 (2017)
Section Original article
DOI
Keywords Bạch cầu cấp dòng lympho (BCCDL), trẻ em, biến thể NUDT15, 6-mercaptopurine, giải trình tự chuỗi DNA Acute lymphoblastic leukemia (ALL), children, NUDT15 variants, 6-Mercaptopurine, direct DNA sequencing

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Cao Van Dong, & Hoang Anh Vu 2, Vo Thi Thanh Truc, Nguyen Tan Binh, Phu Chi Dung, Phan Thi Xinh. (2017). Detection of NUDT15 variants in acute lymphoblastic leukemia patients using direct DNA sequencing. Journal of Clinical Medicine Hue Central Hospital, (46), 41–48. Retrieved from https://jcmhch.com.vn/index.php/home/article/view/2188