Bidirectionalallele specific PCR integrated with amplification refractory mutation system –(DSA-PCR-ARMS) for analyzing carland Jak2 V617F mutations in patients with myeloproliferative neoplasm

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Abstract

Bachground: Jak2 V617F and CARLmutation arerecognized as essential molecular genetic markers in diagnostic definition of myeloid proliferative neoplasm (MPN).

Objective: To establish an income relevant Allele-specific-PCR-ARMS (DSA-PCR-ARMS) assays to identify Jak2 V617F, CARL mutations in MPN patients.

Subjects: 64 MPN patients’ samples, one V617F positive referrance samples and one CALR mutant positive sample.
Methods: Dilution series of 100%, 50%, 25%, 5%, 0.5% and 0% mutant alleles were created as pseudo-samples establish the detection limits and the technical specificity of DSA-PCR-ARMS assays in identifying the mentioned genetics markers.

Result: Our approach can detect presence of 0.5 % V617F mutant DNA fragment; beside that just by one gel-based PCR reaction, we can differentiate the deletion/insertion CARL carriers from the wild
type counterpart. By applying our approachesto a study cohort of 50 MPN cases, a sensitivity of 64% and specificity of 100% was recorded for our Jak2 C617F detection assay and we also detected 3 CARL mutation case amongst the 10 V617F negative cases.

Conclusion: The in-house of Jak2 V617F/CARL mutation detection protocols have been successfully established in our hospital.

https://doi.org/10.38103/jcmhch.2020.59.8

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Published 20-02-2020
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Issue No. 59 (2020)
Section Original article
DOI 10.38103/jcmhch.2020.59.8
Keywords Jak2 V617F, CARL, hội chứng tăng sản tủy (MPN) Jak2 V617F, CARL, myeloid proliferative neoplasm (MPN).

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Copyright (c) 2020 Journal of Clinical Medicine Hue Central Hospital

Ngô Tất Trung, Đào Thanh Quyên, Phan Quốc Hoàn, & Lê Hữu Song. (2020). Bidirectionalallele specific PCR integrated with amplification refractory mutation system –(DSA-PCR-ARMS) for analyzing carland Jak2 V617F mutations in patients with myeloproliferative neoplasm. Journal of Clinical Medicine Hue Central Hospital, (59), 59–66. https://doi.org/10.38103/jcmhch.2020.59.8